publications

2023

2022

1. Td-gen: Graph generation using tree decomposition

   Hamed Shirzad, Hossein Hajimirsadeghi, Amir H Abdi, and 1 more author

   In International Conference on Artificial Intelligence and Statistics 2022
2. Scaleformer: iterative multi-scale refining transformers for time series forecasting

   Amin Shabani, Amir Abdi, Lili Meng, and 1 more author

   arXiv preprint arXiv:2206.04038 2022
3. Stop overcomplicating selective classification: Use max-logit

   Leo Feng, Mohamed Osama Ahmed, Hossein Hajimirsadeghi, and 1 more author

   arXiv preprint arXiv:2206.09034 2022

2021

1. Echocardiographic image analysis

   Amir H. Abdi, Purang Abolmaesumi, Robert Rohling, and 1 more author

   Sep 2021
2. Automated estimation of echocardiogram image quality in hospitalized patients

   Christina Luong, Zhibin Liao, Amir Abdi, and 8 more authors

   The International Journal of Cardiovascular Imaging Sep 2021
3. Snake-based interactive tooth segmentation for 3D mandibular meshes

   Rui Yang, Amir H Abdi, Atabak Eghbal, and 6 more authors

   In Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling Sep 2021

2020

1. Automatic cine-based detection of patients at high risk of heart failure with reduced ejection fraction in echocardiograms

   Delaram Behnami, Christina Luong, Hooman Vaseli, and 7 more authors

   Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization Sep 2020
2. Ultrasonic image analysis

   Purang Abolmaesumi, Robert Rohling, Teresa Tsang, and 2 more authors

   Aug 2020
3. Creation of categorical mandible atlas to benefit non-rigid registration

   Heather Borgard, Amir H Abdi, Eitan Prisman, and 1 more author

   In Computer Methods, Imaging and Visualization in Biomechanics and Biomedical Engineering: Selected Papers from the 16th International Symposium CMBBE and 4th Conference on Imaging and Visualization, August 14-16, 2019, New York City, USA Aug 2020
4. Characterizing motor control of mastication with soft actor-critic

   Amir H Abdi, Benedikt Sagl, Venkata P Srungarapu, and 4 more authors

   Frontiers in Human Neuroscience Aug 2020
5. Machine learnt treatment: machine learning and registration techniques for digitally planned jaw reconstructive surgery

   Amir H Abdi

   Aug 2020

2019

1. Muscle Excitation Estimation in Biomechanical Simulation Using NAF Reinforcement Learning

   Amir H Abdi, Pramit Saha, Praneeth Srungarapu, and 1 more author

   Aug 2019
2. AnatomyGen: Deep anatomy generation from dense representation with applications in mandible synthesis

   Amir H Abdi, Heather Borgard, Purang Abolmaesumi, and 1 more author

   In Medical Imaging with Deep Learning Aug 2019
3. Agreement of the clinician’s choice of archwire selection on conventional and virtual models

   Sahar Haddadpour, Saeed Reza Motamedian, Mohammad Behnaz, and 4 more authors

   The Angle Orthodontist Aug 2019
4. Designing lightweight deep learning models for echocardiography view classification

   Hooman Vaseli, Zhibin Liao, Amir H Abdi, and 8 more authors

   In Medical Imaging 2019: Image-Guided Procedures, Robotic Interventions, and Modeling Aug 2019
5. Three-dimensional measurement of tooth inclination: A longitudinal study

   Mahtab Nouri, Sahar Khaje Hosseini, Sohrab Asefi, and 2 more authors

   Dental Research Journal Aug 2019
6. Variational Shape Completion for Virtual Planning of Jaw Reconstructive Surgery

   Amir H Abdi, Mehran Pesteie, Eitan Prisman, and 2 more authors

   In International Conference on Medical Image Computing and Computer-Assisted Intervention Aug 2019
7. Semi-supervised learning for cardiac left ventricle segmentation using conditional deep generative models as prior

   Mohammad H Jafari, Hany Girgis, Amir H Abdi, and 6 more authors

   In 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019) Aug 2019
8. A preliminary study of disentanglement with insights on the inadequacy of metrics

   Amir H Abdi, Purang Abolmaesumi, and Sidney Fels

   arXiv preprint arXiv:1911.11791 Aug 2019
9. Reinforcement Learning for High-dimensional Continuous Control in Biomechanics: An Intro to ArtiSynth-RL

   Amir H Abdi, Masoud Malakoutian, Thomas Oxland, and 1 more author

   In Deep Reinforcement Learning Workshop NeurIPS 2019 Aug 2019
10. On modelling label uncertainty in deep neural networks: automatic estimation of intra-observer variability in 2d echocardiography quality assessment

    Zhibin Liao, Hany Girgis, Amir Abdi, and 6 more authors

    IEEE transactions on medical imaging Aug 2019
11. GAN-enhanced conditional echocardiogram generation

    Amir H Abdi, Teresa Tsang, and Purang Abolmaesumi

    arXiv preprint arXiv:1911.02121 Aug 2019
12. Variational learning with disentanglement-pytorch

    Amir H Abdi, Purang Abolmaesumi, and Sidney Fels

    arXiv preprint arXiv:1912.05184 Aug 2019
13. Can 3D imaging and digital software increase the ability to predict dental arch form after orthodontic treatment?

    Sahar Hadadpour, Mohammad Noruzian, Amir H Abdi, and 2 more authors

    American Journal of Orthodontics and Dentofacial Orthopedics Aug 2019
14. A study into echocardiography view conversion

    Amir H Abdi, Mohammad H Jafari, Sidney Fels, and 2 more authors

    arXiv preprint arXiv:1912.03120 Aug 2019

2018

1. Minimizing fiducial localization error using sphere-based registration in jaw tracking

   Amir H Abdi, Alan G Hannam, Ian K Stavness, and 1 more author

   Journal of Biomechanics Aug 2018
2. Fiducial-based fusion of 3D dental models with magnetic resonance imaging

   Amir H Abdi, Alan G Hannam, and Sidney Fels

   International Journal of Computer Assisted Radiology and Surgery Aug 2018
3. The effect of occlusogingival placement of clinical bracket points on the adaptation of a straight wire to the lingual arch form

   Amir Hossein Abdi, Saeed Reza Motamedian, Ehsan Balaghi, and 1 more author

   The Korean Journal of Orthodontics Aug 2018
4. Quantitative echocardiography: real-time quality estimation and view classification implemented on a mobile android device

   Nathan Van Woudenberg, Zhibin Liao, Amir H Abdi, and 8 more authors

   In Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation: International Workshops, POCUS 2018, BIVPCS 2018, CuRIOUS 2018, and CPM 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16–20, 2018, Proceedings Aug 2018
5. Automatic detection of patients with a high risk of systolic cardiac failure in echocardiography

   Delaram Behnami, Christina Luong, Hooman Vaseli, and 7 more authors

   In Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support: 4th International Workshop, DLMIA 2018, and 8th International Workshop, ML-CDS 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings 4 Aug 2018
6. A unified framework integrating recurrent fully-convolutional networks and optical flow for segmentation of the left ventricle in echocardiography data

   Mohammad H Jafari, Hany Girgis, Zhibin Liao, and 8 more authors

   In Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support: 4th International Workshop, DLMIA 2018, and 8th International Workshop, ML-CDS 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings 4 Aug 2018
7. Cardiac phase detection in echocardiograms with densely gated recurrent neural networks and global extrema loss

   Fatemeh Taheri Dezaki, Zhibin Liao, Christina Luong, and 8 more authors

   IEEE transactions on medical imaging Aug 2018

2017

1. Registration of serial maxillary models via the weighted rugae superimposition method

   Amir H Abdi, and M Nouri

   Orthodontics & Craniofacial Research Aug 2017
2. Automatic quality assessment of apical four-chamber echocardiograms using deep convolutional neural networks

   Amir H Abdi, Christina Luongb, Teresa Tsangb, and 8 more authors

   In SPIE Medical Imaging Aug 2017
3. Automatic quality assessment of echocardiograms using convolutional neural networks: feasibility on the apical four-chamber view

   Amir H Abdi, Christina Luong, Teresa Tsang, and 8 more authors

   IEEE transactions on medical imaging Aug 2017
4. Quality assessment of echocardiographic cine using recurrent neural networks: Feasibility on five standard view planes

   Amir H Abdi, Christina Luong, Teresa Tsang, and 6 more authors

   In Medical Image Computing and Computer Assisted Intervention- MICCAI 2017: 20th International Conference, Quebec City, QC, Canada, September 11-13, 2017, Proceedings, Part III 20 Aug 2017
5. Deep residual recurrent neural networks for characterisation of cardiac cycle phase from echocardiograms

   Fatemeh Taheri Dezaki, Neeraj Dhungel, Amir H Abdi, and 7 more authors

   In Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support: Third International Workshop, DLMIA 2017, and 7th International Workshop, ML-CDS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 14, Proceedings 3 Aug 2017
6. Panoramic Dental X-rays with Segmented Mandibles

   Amir H. Abdi, and Shohreh Kasaei

   Aug 2017

2016

1. Automatic quality assessment of echo apical 4-chamber images using computer deep learning

   Christina Luong, Amir Abdi, John Jue, and 4 more authors

   Circulation Aug 2016
2. Evaluation of tooth inclinations in Iranian preteens with normal occlusion by 3D software

   Amir Hossein Abdi, Maryam Khaje Hosseini, Mohammad Norouzian, and 2 more authors

   In 12th Annual Meeting of Iranian Division of IADR Aug 2016

2015

1. Comments regarding: Pereira SA, Lopez M, Lavado N, Abreu JM, Silva H. A clinical risk prediction model of orthodontic-induced external apical root resorption. Revista Portuguesa de Estomatologia, Medicina Dentária e Cirurgia Maxilofacial 2014; 55 (2): 66-72

   Amir H Abdi, and Farnaz Younessian

   Revista Portuguesa de Estomatologia, Medicina Dentária e Cirurgia Maxilofacial Aug 2015
2. Automatic segmentation of mandible in panoramic x-ray

   Amir Hossein Abdi, Shohreh Kasaei, and Mojdeh Mehdizadeh

   Journal of Medical Imaging Aug 2015

2014

1. Measurement of the buccolingual inclination of teeth: manual technique vs 3-dimensional software

   Mahtab Nouri, Amir Hossein Abdi, Arash Farzan, and 2 more authors

   American journal of orthodontics and dentofacial orthopedics Aug 2014